Biology and Physical Factors #3: Clocks
The circadian rhythm. It’s a natural oscillation within the bodies of living things with a periodicity of a day – 24 hours (It’s why we experience jet lag). What acts as this clock in living things? Raghuveer Parthasarathy explains the concept in So Simple a Beginning : “The simplest possible oscillator is a gene that represses itself.” This sounds crazy at first: once repressed, how would it activate itself again? “The answer lies in the fact that both expression and repression take time.” He elaborates. But first, a quick recap from an earlier blog: DNA has the gene to create the protein, and promoter and repressor sites before it. When read, the gene produces the protein (red blob) which attaches itself to the repressor site, thus physically blocking any RNA attempts to read the gene. Coming back to the oscillator. All the above steps (creating the protein, then for the protein to “meander and find the promoter region”) take time. Ok, so it took time. But isn’t the gen...